Insertion junction: CLIP2.052635_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.052635
Chromosome:chromosome 3
Location:548893
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g145207 CPLD33 Conserved in the Plant Lineage and Diatoms; (1 of 1) PTHR36359:SF1 - RESISTANCE TO PHYTOPHTHORA 1 PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTATGCAGCAGCGCGTTCTGCAGGCGCGTCCCCAGCGTCCTGCATCGC
Internal bar code:GGAAGAGGTGAGGTATCACCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:511
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCAATGCCATCCCACAG
Suggested primer 2:ACAGCTGTGCACATTGCTTG