Insertion junction: CLIP2.052635_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052635
Chromosome:chromosome 17
Location:2755460
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g717850 PHC8 (1 of 1) IPR003882//IPR024616//IPR027417 - Pistil-specific extensin-like protein // Pherophorin // P-loop containing nucleoside triphosphate hydrolase; Pherophorin-chlamydomonas homolog 8 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCTGTCGAACAGGGCAGCCGTGCACACGCCGGCGGGCATGCCGGCCG
Internal bar code:GCGGGCTTATCGTACAAGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2599
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GAACACCTTTCGTTCACGCC
Suggested primer 2:GAGAGGGAGGGAGAGGAGAG