Insertion junction: CLIP2.052637_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052637
Chromosome:chromosome 6
Location:2766742
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g271250 HTR8 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACCTGCGCTTCCAGAGCCAGGCCGTGCTGGCGCTGCAGGAGGCCGCCG
Internal bar code:CTTGTAGTGGAGGTTAGTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2460
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCACACAGGTTCTGCTG
Suggested primer 2:CTTGGTGATGCCCTGGATGT