Insertion junction: CLIP2.052637_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052637
Chromosome:chromosome 6
Location:2766753
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g271250 HTR8 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGCGATCTCACGCACCAGGCGCTGGAATGGCAGCTTGCGGATCAGCA
Internal bar code:GTCGTAACGTTGAGCCCTTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4731
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGTGATGCCCTGGATGT
Suggested primer 2:GTTGCACACAGGTTCTGCTG