Insertion junction: CLIP2.052638_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.052638
Chromosome:chromosome 11
Location:3867650
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479600 MHX1,CAX6 (1 of 1) K05849 - solute carrier family 8 (sodium/calcium exchanger) (SLC8A, NCX); putative Ca2+/Na+ exchanger intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTAGTAAAATACGGTTGTTTTGGGGGCCCGCAAATGTGAACGGATCCA
Internal bar code:CGTAAATGGCCTTGCTTGCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:132
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCGTCCACACCTGTTTTT
Suggested primer 2:CGCCTGCTGGGTACTCATAG