Insertion junction: CLIP2.052643_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052643
Chromosome:chromosome 10
Location:4983393
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g454300 (1 of 1) IPR003613//IPR011009 - U box domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGTCTCCTTTTGTGCTTTGCCTGACATAGGCCTCTCGATGCGGCGCGA
Internal bar code:CCTAGGGCAGATTGCTTGTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2207
LEAP-Seq percent confirming:18.9189
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GACCCGAAACGTACAGTCGT
Suggested primer 2:GGACGGTCAATTGACGCAAC