Insertion junction: CLIP2.052645_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052645
Chromosome:chromosome 12
Location:3331538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498650 ALK3 (1 of 9) IPR000719//IPR002290//IPR011009//IPR020635//IPR027916 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Protein kinase-like domain, Apicomplexa; Aurora-like kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCACATGGCCTTGTTGAACAGGATGTTCTCGGGCTTGATGTCCTGCG
Internal bar code:GATCAGGCTTTACGCGGCAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2204
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTACAAGGCGGTGTGTC
Suggested primer 2:CTTCACATCTGCATGCTGGC