Insertion junction: CLIP2.052652_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052652
Chromosome:chromosome 17
Location:6861249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g747397 (1 of 1) PTHR24362//PTHR24362:SF284 - SERINE/THREONINE-PROTEIN KINASE NEK // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGGGCCCGGAACACGTAGGCCTTGAGACTGAGCACCTCACGGCTGGA
Internal bar code:CCTGTCGCAGGACGGTCGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:400
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAGATGTACCACGTGAGG
Suggested primer 2:CAACGCATATGGCACCATGG