Insertion junction: CLIP2.052655_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052655
Chromosome:chromosome 6
Location:2019378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265500 HTR11B Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAGCTCAGTCGACTTCTGGTACTTGCGGATCTCGCGCAGCGCCACGG
Internal bar code:GAGCTTGAACGGTAAGGAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5058
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:CGGATAGCGGGCTTGGTAAT
Suggested primer 2:GAACCTCAGAAGCCCAACGA