Insertion junction: CLIP2.052657_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.052657
Chromosome:chromosome 1
Location:3026337
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g019100 HPR2 Hydroxypyruvate reductase 2; (1 of 1) PTHR10996//PTHR10996:SF20 - 2-HYDROXYACID DEHYDROGENASE-RELATED // D-3-PHOSPHOGLYCERATE DEHYDROGENASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGCCGCGCCCACCACCCCCGTGGTCGGGATGAGCACGCGCATGCCCG
Internal bar code:TTCACGTAACATTGCCAGTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1825
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGTTTAAGGGGCTGTTCT
Suggested primer 2:GAGGATCATCATCAGCGCCA