Insertion junction: CLIP2.052665_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052665
Chromosome:chromosome 12
Location:9019596
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544900 (1 of 1) PTHR16470:SF0 - UBIQUITIN DOMAIN-CONTAINING PROTEIN UBFD1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGGCGTGCAGAGCCTGATCTGATATGATATGATCTGACAGTTTACTG
Internal bar code:ACAGTGTCCCACTGTGATCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:279
LEAP-Seq percent confirming:13.3333
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCCACAAACCACTGTCAA
Suggested primer 2:GCAGATCTGGATCGGGTCTG