Insertion junction: CLIP2.052674_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052674
Chromosome:chromosome 6
Location:4173122
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278234 FAP343 (1 of 19) PF00397 - WW domain (WW); Flagellar Associated Protein 343 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCACCGGTGCTGACACACGCACCTCGTCGAATAACTTCTTCTGGGCG
Internal bar code:TTGATTACCGGACGATGGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:953
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGTAGCTGTGTGGTCGTG
Suggested primer 2:CAGGGGACATGGGTTGCTAG