Insertion junction: CLIP2.052675_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.052675
Chromosome:chromosome 17
Location:6549987
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g744947 (1 of 1) 2.1.1.230 - 23S rRNA (adenosine(1067)-2'-O)-methyltransferase / Thiostrepton-resistance methylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCCAGCTCCGCCGCCGCCGTCACGCCTGCCGCGTTGTCCAGACCCGT
Internal bar code:TTAAGTTGTTGGATACGCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:620
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGGGAGAGGGAGAGCAAG
Suggested primer 2:ACGTAAGCGCACTTAGCTGT