Insertion junction: CLIP2.052681_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052681
Chromosome:chromosome 10
Location:797535
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423050 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTTACGCACCTGTCAGCTGAGGAGCGGGAAGGGCTGCTGAGCCAGAA
Internal bar code:GTTGTCGTGAAATGGTAGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4494
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAACAGCTTTGTGGACGG
Suggested primer 2:CAGCAACTCGTCGGTACAGT