Insertion junction: CLIP2.052699_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052699
Chromosome:chromosome 12
Location:6340248
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g537000 (1 of 1) PF02041 - Auxin binding protein (Auxin_BP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCATGCGTGGTTACACTGAACATGTACCGTACACAGCCCCTCACTCACA
Internal bar code:TTGTGGTTCTGGGAATGTCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1100
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGTGCCTGAGCTCAAAT
Suggested primer 2:CGTAGTGAGCCTCATAGCGG