Insertion junction: CLIP2.052702_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052702
Chromosome:chromosome 8
Location:1230304
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g363350 (1 of 2) IPR003034//IPR009061 - SAP domain // Putative DNA-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCAGCAGCCGGACCACCAGCTCGGGCTTGGTGCCGCTGACCATTTC
Internal bar code:TCTAGAATAAAGCTAGGTTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:397
LEAP-Seq percent confirming:76.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTTACAACACGGAGGGG
Suggested primer 2:CAGGCGCCTGAATGTGAGTA