Insertion junction: CLIP2.052725_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052725
Chromosome:chromosome 3
Location:495592
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145027 (1 of 14) PF13371 - Tetratricopeptide repeat (TPR_9) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTCCACCGACCCCACCGCCATCCTCCCCGCCACCATCCACCGCTTCT
Internal bar code:GCTCGGAGTTATTAGTCTTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:474
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGAGCTTTTGTCGGTGA
Suggested primer 2:CATGCTCTACGCCTACCTGG