Insertion junction: CLIP2.052740_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052740
Chromosome:chromosome 2
Location:6924533
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388986 (1 of 1) PTHR23329//PTHR23329:SF9 - TUFTELIN-INTERACTING PROTEIN 11-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTCATGGCACTACACGAGCGGCACCGAGAGTTTAGTGTGACGGTCTTG
Internal bar code:AATCACTTGGACCCGGCGCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1696
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCATCCCTCTCTTCCTCC
Suggested primer 2:ACGAGGAGGATGAGGAGGAC