Insertion junction: CLIP2.052741_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052741
Chromosome:chromosome 12
Location:6328041
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536900 (1 of 1) IPR000104//IPR003072//IPR003495//IPR011629//IPR012336//IPR027417 - Antifreeze protein, type I // Orphan nuclear receptor, NOR1 type // CobW/HypB/UreG domain // Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal // Thioredoxin-like fold // P-loop containing nucleoside triphosphate hydrolase; Putative metallochaperone intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTCCTTGACTCCTTGCACCCCTCCTTTCCCGTTCACACGACGGCGCAG
Internal bar code:GCGAATGAGACCTGAACAATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:708
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGTTGAAGAGCACAAGG
Suggested primer 2:GTCCGTTCTAGCAGGCTTGT