Insertion junction: CLIP2.052752_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.052752
Chromosome:chromosome 3
Location:7702254
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g203700 DEGO1,DEG12 DegP-type protease-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTGATATTGTATCGTTCTCACGCGTACCCAGGCCGAAAACCCGGCTC
Internal bar code:TACATTAGGTGGCTCGGATAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:955
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGTGTTCGTGTACGGGT
Suggested primer 2:GCGCGCTTCGTAACTTACAG