Insertion junction: CLIP2.052760_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052760
Chromosome:chromosome 10
Location:3475657
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g444600 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGAGGCGGAAGGCGGCGGCAGCGCCAGCAGCCTCGCGAGCCAGGGGCC
Internal bar code:TGCCGTAGAAGCCGTCTGCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2854
LEAP-Seq percent confirming:19.7368
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:61
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAAGGTCAGAGCCAACGT
Suggested primer 2:AAACAGTGGTGTCTAGCCCG