Insertion junction: CLIP2.052762_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052762
Chromosome:chromosome 12
Location:6954406
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00238175

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCATGTGATTGTTGACGTGTTTCACGCAAGACCAAATCCATTGTCAG
Internal bar code:AAGTTGTGTGTCGGGCAAGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1958
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGAGAGCGGCTCATACC
Suggested primer 2:CAGGGTATGGGCTAGCTTCG