Insertion junction: CLIP2.052777_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.052777
Chromosome:chromosome 1
Location:3163893
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g020182 (1 of 226) IPR012337 - Ribonuclease H-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCGGTCGGCCCCGCCGGCGTAACCACGACGTACATTCAGGTCCCACA
Internal bar code:AGTTTACTATCGCATAAATGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:378
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAGTGCTTCACCAACGGA
Suggested primer 2:ATTCCTGACAACGGCGAGTT