Insertion junction: CLIP2.052780_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.052780
Chromosome:chromosome 16
Location:4715933
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677702 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGGCGGGGCCCGGCGCCGCCGCCGCCGCATGCGTCAGCGCATGCGCC
Internal bar code:TTCCCGCTATATGCTCTCCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:603
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGGTTTCAGTTGTGGGTT
Suggested primer 2:CGCTTCATTTCGCCTTGCTT