Insertion junction: CLIP2.052780_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052780
Chromosome:chromosome 16
Location:4715933
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677702 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGGCGCTGCTGACGCACGTGTTGGGCGAACTGCGGGAGCTGGTGGCG
Internal bar code:TTCCCGCTATATGCTCTCCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:629
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTTCATTTCGCCTTGCTT
Suggested primer 2:ACGGGTTTCAGTTGTGGGTT