Insertion junction: CLIP2.052784_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052784
Chromosome:chromosome 3
Location:4134473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172750 (1 of 1) IPR002893//IPR012677 - Zinc finger, MYND-type // Nucleotide-binding alpha-beta plait domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGAGATTGGAGCTGACCACGACCTGCAGGGGCGCTAGTACGCACTGCA
Internal bar code:AAGGGGAGGTGGTGGGGCCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1176
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CACATTCTATGCGCACACGG
Suggested primer 2:AATGTACGCGGTAGGCACAA