Insertion junction: CLIP2.052784_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052784
Chromosome:chromosome 3
Location:4134475
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172750 (1 of 1) IPR002893//IPR012677 - Zinc finger, MYND-type // Nucleotide-binding alpha-beta plait domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCACCCGCGGCGTCAGAGCTGCGGGCGGTGCTGCGTCGGACCGCGCTG
Internal bar code:AAGGGGAGGTGGTGGGGCCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4814
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:AATGTACGCGGTAGGCACAA
Suggested primer 2:CACATTCTATGCGCACACGG