Insertion junction: CLIP2.052789_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.052789
Chromosome:chromosome 13
Location:3712852
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588405 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGGAAGCGCTGCAAGTCGCCTGGGCGCAGCTCAAGGCCCAGGCCAAA
Internal bar code:ATTCACATTTGGTTTATATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:924
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTGACGAGGAGTATGGCGAC
Suggested primer 2:TGAACTTCCTGCTGGTCGAC