Insertion junction: CLIP2.052793_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.052793
Chromosome:chromosome 17
Location:2808735
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718250 DRR1 (1 of 1) PTHR10491 - DTDP-4-DEHYDRORHAMNOSE REDUCTASE; dTDP-4-dehydrorhamnose reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACCTGCCGCGCCATATCCACGCGTGACAGCCGCTCCGGTCCACCC
Internal bar code:AGGGGTACCCGACTAGTGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:422
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGACCTCAGAACCCCTTTCC
Suggested primer 2:CCTGCTCCACCACCATCAAT