Insertion junction: CLIP2.052804_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052804
Chromosome:chromosome 14
Location:2869217
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g627150 (1 of 1) PF05670//PF05833 - Domain of unknown function (DUF814) (DUF814) // Fibronectin-binding protein A N-terminus (FbpA) (FbpA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCACACTCCTGCTAGCCATACTTACTATCCGCCCTGAACGCCGCGCGC
Internal bar code:TGTCGGTGTTATCATAACAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:165
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCATGAACAGCACAGGGA
Suggested primer 2:CAGGTACAGGCTGTGACTGG