Insertion junction: CLIP2.052807_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052807
Chromosome:chromosome 14
Location:2675565
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g625625 FTSH11 FtsH-like membrane ATPase/metalloprotease; (1 of 2) IPR000642//IPR003593//IPR005936//IPR011704//IPR027417 - Peptidase M41 // AAA+ ATPase domain // Peptidase, FtsH // ATPase, dynein-related, AAA domain // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCTCTATCGCGTACGGACAGCCGTACATACACACTGCCGTACACACAC
Internal bar code:CTTTGGAGTTGGTCGGGCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1177
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTCCCGTCTAGCTCATC
Suggested primer 2:TAGGGGAATTTGCCGTGCAT