Insertion junction: CLIP2.052809_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052809
Chromosome:chromosome 17
Location:167414
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g697000 (1 of 2) PTHR23155:SF401 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCTGCAGGCAGGGGGCATGTAGGGGTGAGGTAGGGGACATGTAGCGGT
Internal bar code:CGCATTGTGCCTAAGAGTACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:216
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGGTATCTTGGGGGTGG
Suggested primer 2:GTTGGGAAAGCGGTACAGGA