Insertion junction: CLIP2.052811_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.052811
Chromosome:chromosome 9
Location:5654209
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410150 (1 of 140) IPR002048 - EF-hand domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCAGCCATAATGCTCTGTGAATGTCATGAGGGCAGCGGGCGGATCAC
Internal bar code:CGCTAAGGTCAATACGATTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1488
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCCGTTTGCATACCAGT
Suggested primer 2:AAGTAGTCCCGATTTGCGCA