Insertion junction: CLIP2.052815_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.052815
Chromosome:chromosome 5
Location:2971433
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g230700 (1 of 274) IPR020683 - Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGAAGTGGTACAATGGGGGGGGGTAAGATTCCAGCCCAAACTAACTGA
Internal bar code:GTATGTCGTCTCTATAGTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2722
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTCGTTTGTGTTGCAGT
Suggested primer 2:TGTGCTGGCGACAATTTGTG