Insertion junction: CLIP2.052825_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052825
Chromosome:chromosome 4
Location:216771
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217200 (1 of 2) IPR000104//IPR013083 - Antifreeze protein, type I // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAAGCGCAAGGCGAAGCGCGTGGAAGAGGCCGCGATTGCGGCGGCGGC
Internal bar code:AGGTTCTGACGACATTCACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1251
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTGAGAGCGTGACCAGTG
Suggested primer 2:ATCATGTCCGAGCACCGATC