Insertion junction: CLIP2.052827_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052827
Chromosome:chromosome 7
Location:1179854
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g321200 (1 of 5) PTHR13271//PTHR13271:SF28 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR
Cre07.g800774 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGGACGCGATGGCCAGTGGTGACCAGAGGGGTTTAGCGCGTGTCATT
Internal bar code:GCTGTGCAGCCATTTAACATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1507
LEAP-Seq percent confirming:86.8421
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTGGAGATCAAGGTGT
Suggested primer 2:ATCGAGCACTAGAGCATGGC