Insertion junction: CLIP2.052829_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052829
Chromosome:chromosome 16
Location:7707574
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686398 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTCCACGGCTGCCCTCGAGTTATTGTGACGATATGGCCGGAAGGACCG
Internal bar code:CTTGGCCGTCGTATAGAGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1021
LEAP-Seq percent confirming:73.8095
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTCAGCCAATTGTTTGC
Suggested primer 2:TGCTAAGGTGGCTGTAGCAC