Insertion junction: CLIP2.052833_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052833
Chromosome:chromosome 5
Location:275716
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243351 (1 of 3) IPR000477//IPR002156//IPR012337 - Reverse transcriptase domain // Ribonuclease H domain // Ribonuclease H-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGCATCTCGCCCTCCAAGCGCGAGCGCTACGCGGCTGACGTCCGGCA
Internal bar code:TTCTATCGTTTGAGGGTTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3084
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCTTGAAGCTCCACATCT
Suggested primer 2:CACCACCTGTCGAACTACCC