Insertion junction: CLIP2.052833_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052833
Chromosome:chromosome 6
Location:6347831
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293100 (1 of 2) PTHR19957:SF124 - SYNTAXIN-8B-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGGGCATCGTCGGGGCTTGGGGCGTCAGCGGCTAGCTGCATGGCTGT
Internal bar code:ATTTGGCTGCAAAAGCAATTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3816
LEAP-Seq percent confirming:56.8493
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:63
LEAP-Seq n unique pos:146

Suggested primers for confirmation by PCR

Suggested primer 1:GGACATCGACGAGCAGGTAG
Suggested primer 2:TATGGATGTGGAGGGCAGGA