Insertion junction: CLIP2.052835_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052835
Chromosome:chromosome 13
Location:2666205
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581350 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACCTCCCAGTGCCCAGCAGCTGGCGGTGGCGTGGGCACAGCTGCACG
Internal bar code:TACTGCGTTATGTGAAATCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1073
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CATCAGCATCCAACATGGCG
Suggested primer 2:CGGTGACTTCACTTCCGACA