Insertion junction: CLIP2.052835_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052835
Chromosome:chromosome 13
Location:2666212
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581350 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTTGGGGCACCAGGGCGTCACCGGCCAGGCCGCCCAGCAGCAGCGGCT
Internal bar code:GTCTACTGTCACACTAGGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2569
LEAP-Seq percent confirming:86.5672
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGACTTCACTTCCGACA
Suggested primer 2:CATCAGCATCCAACATGGCG