Insertion junction: CLIP2.052837_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052837
Chromosome:chromosome 17
Location:526355
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699350 SMM51 (1 of 13) PF12847 - Methyltransferase domain (Methyltransf_18); S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTTCGTGCAGTCTGGGGCGGCAAGGGCCAAGCGTACCTGGTCGCGGCG
Internal bar code:AAAGCTCCCTCTTGACCTAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2466
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCTTGACTGCCTGTACA
Suggested primer 2:GGGGCTGCTGCTAAGTAACA