Insertion junction: CLIP2.052843_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.052843
Chromosome:chromosome 17
Location:5013624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g735850 (1 of 1) PF07303 - Occludin homology domain (Occludin_ELL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACTAAACCCGCCCCAACTCCAAGAACACACCCCGCCTGCATGACCGC
Internal bar code:GTGCGGTTTGGCTTGGGAAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:160
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCATCACATGGCCAATG
Suggested primer 2:TTTGCACTTTCTGCCTTCGC