Insertion junction: CLIP2.052853_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052853
Chromosome:chromosome 12
Location:1290708
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489450 (1 of 2) IPR017993 - Atrophin-1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGTGAATAAGTATCAACACAGCGGTAGGGGCAGGGTAGGGGCGCTTGC
Internal bar code:GTTATTAAGGTATGGGAACTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2820
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGCCTCAAACCAAATGTG
Suggested primer 2:GTTTGTCACTTTGTCGGGCC