Insertion junction: CLIP2.052859_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052859
Chromosome:chromosome 12
Location:2113322
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510000 (1 of 2) PF05542 - Protein of unknown function (DUF760) (DUF760) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATGAAACGACGTTTTATGGCTGGTGAACGGTGCGGGCGGTGGCGGGG
Internal bar code:TTACCAAAGGACTTACGTCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:693
LEAP-Seq percent confirming:73.6842
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGACTGGGCGGGTAAAA
Suggested primer 2:ATCATAGAGCTTCCGCACCG