Insertion junction: CLIP2.052861_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052861
Chromosome:chromosome 9
Location:2728547
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391500 ATG9 (1 of 1) K17907 - autophagy-related protein 9 (ATG9); Autophagy related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTTTGGGCCCGAGCGCATCGCGCCAAACATCCTTTGCAACCCCCCACC
Internal bar code:TCAATCTGGATGCGGCTCTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:514
LEAP-Seq percent confirming:59.0909
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTGTTGTCGGTGGGACT
Suggested primer 2:TCGAGGCCGTTACTGTCAAC