Insertion junction: CLIP2.052861_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052861
Chromosome:chromosome 9
Location:2728550
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391500 ATG9 (1 of 1) K17907 - autophagy-related protein 9 (ATG9); Autophagy related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGACAAGGCGGGACGGAACGGCGCAGGCGCCAGGGGCGCCACCAGGG
Internal bar code:GCATTATGAAAAGTTACTCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:212
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAGGCCGTTACTGTCAAC
Suggested primer 2:GACTTGTTGTCGGTGGGACT