Insertion junction: CLIP2.052872_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.052872
Chromosome:chromosome 1
Location:4749108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032950 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGTAGGGAAGCTAGTGCCGACTGCAACAAGCAGGAGGGCACCATGCG
Internal bar code:GAGTGTGGGTTTGGATTCTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1672
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTAAGACGCCGGCTCTAGTG
Suggested primer 2:GGCCCCTTACACCCTAGGTA