Insertion junction: CLIP2.052877_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052877
Chromosome:chromosome 16
Location:7947308
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690767 (1 of 3) PF02737 - 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain (3HCDH_N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATAAGGATAGGCGGCAGGGAGAAGTCAGCATGAGCGAGAAGCGGCCT
Internal bar code:CGTTCGAGACAGCCGGTATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4618
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTAGGACCCATCTGGCCT
Suggested primer 2:GTGAAATGATGGCCTGGGGA