Insertion junction: CLIP2.052891_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052891
Chromosome:chromosome 5
Location:2604950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g239800 ARS14 Arylsulfatase; (1 of 19) 3.1.6.1 - Arylsulfatase / Sulfatase outside_mRNA
Cre05.g239850 PHO4,PHOD Alkaline phosphatase; (1 of 1) PTHR22953//PTHR22953:SF28 - ACID PHOSPHATASE RELATED // SUBFAMILY NOT NAMED 5'UTR/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGACGAGCTCAGTTGCTCGTTGTGGGCTCGCATATTGTGCGTTGTTG
Internal bar code:GAAGGATCGAGGATCTGTATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1748
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCTCCTGTCGATGAAAC
Suggested primer 2:TGGAAAAAGTGTGGGCTGGT